Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphohydrolase | APR52_15475 | Not Available | Positive | 3354958 - 3355521 | 20359.1 |
| hypothetical protein | APR52_15480 | Not Available | Positive | 3355518 - 3355967 | 16424.0 |
| fad-dependent oxidoreductase | APR52_15485 | P37906 | Positive | 3355986 - 3357374 | 50253.2 |
| hypothetical protein | APR52_15490 | Not Available | Positive | 3357479 - 3358348 | 30931.9 |
| omega amino acid--pyruvate aminotransferase | APR52_15495 | P28269 | Negative | 3358349 - 3359701 | 48269.7 |
| lysr family transcriptional regulator | APR52_15500 | Q9I6Z9 | Positive | 3359799 - 3360749 | 34927.3 |
| gntr family transcriptional regulator | APR52_15505 | Not Available | Negative | 3360759 - 3361523 | 29123.0 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_15510 | Not Available | Positive | 3361766 - 3362971 | 43060.0 |
| abc transporter permease | APR52_15515 | P0AEX8 | Positive | 3363057 - 3363917 | 30359.5 |
| abc transporter permease | APR52_15520 | Not Available | Positive | 3363923 - 3364882 | 33922.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
