Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_15425 | Not Available | Positive | 3340791 - 3342092 | 48132.6 |
| hypothetical protein | APR52_15430 | Not Available | Negative | 3342105 - 3344423 | 82624.0 |
| mfs transporter | APR52_15435 | O34691 | Negative | 3344694 - 3346133 | 51358.4 |
| 2-aminoethylphosphonate--pyruvate aminotransferase | APR52_15440 | Q39BS5 | Negative | 3346213 - 3347343 | 40387.6 |
| phosphonate abc transporter permease | APR52_15445 | Not Available | Negative | 3347383 - 3349116 | 62649.4 |
| amino acid abc transporter substrate-binding protein | APR52_15450 | Q92UV5 | Negative | 3349113 - 3350252 | 41449.1 |
| phosphonate abc transporter substrate-binding protein | APR52_15455 | Not Available | Negative | 3350339 - 3351379 | 37976.5 |
| phosphonate utilization associated transcriptional regulator | APR52_15460 | P0ACM2 | Positive | 3351538 - 3352260 | 26734.0 |
| phosphonoacetate hydrolase | APR52_15465 | Q51782 | Positive | 3352262 - 3353488 | 44033.9 |
| phosphonoacetaldehyde dehydrogenase | APR52_15470 | Not Available | Positive | 3353507 - 3354955 | 52813.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
