Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter substrate-binding protein | APR52_15375 | Not Available | Negative | 3329723 - 3330319 | 20891.0 |
| 3-mercaptopyruvate sulfurtransferase | APR52_15380 | Q9I452 | Negative | 3330316 - 3331227 | 32332.2 |
| hypothetical protein | APR52_15385 | Not Available | Negative | 3331298 - 3332221 | 32793.7 |
| rieske (2fe-2s) protein | APR52_15390 | Not Available | Negative | 3332330 - 3333460 | 42892.6 |
| exodeoxyribonuclease vii | APR52_15395 | A1W4U7 | Positive | 3333742 - 3334008 | 9375.17 |
| polyprenyl synthetase | APR52_15400 | B1XJV9 | Positive | 3334005 - 3334925 | 31555.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | APR52_15405 | A1TNR1 | Positive | 3334948 - 3336807 | 66476.9 |
| abc transporter substrate-binding protein | APR52_15410 | Q3J1R2 | Positive | 3336944 - 3338026 | 39565.3 |
| c4-dicarboxylate abc transporter | APR52_15415 | O07838 | Negative | 3338144 - 3339985 | 65072.3 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR52_15420 | Not Available | Negative | 3340004 - 3340627 | 22963.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
