Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s)-binding protein | APR52_15325 | Q88FX9 | Positive | 3318354 - 3318839 | 17177.1 |
| aldehyde dehydrogenase | APR52_15330 | Not Available | Positive | 3318836 - 3321130 | 82661.5 |
| hypothetical protein | APR52_15335 | Not Available | Negative | 3321300 - 3321782 | 17255.7 |
| hypothetical protein | APR52_15340 | Not Available | Negative | 3321899 - 3322657 | 27281.6 |
| hypothetical protein | APR52_15345 | Not Available | Negative | 3322731 - 3323072 | 12570.6 |
| peptidase m20 | APR52_15350 | Not Available | Positive | 3323299 - 3324573 | 44504.8 |
| small-conductance mechanosensitive channel | APR52_15355 | P36682 | Negative | 3324679 - 3326856 | 80905.7 |
| hypothetical protein | APR52_15360 | Not Available | Negative | 3327067 - 3327708 | 22683.3 |
| peptide abc transporter permease | APR52_15365 | Not Available | Negative | 3327713 - 3328975 | 44917.3 |
| methionine abc transporter atp-binding protein | APR52_15370 | Q5X2Z8 | Negative | 3328972 - 3329718 | 27321.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
