Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_00870 | Not Available | Positive | 184479 - 184850 | 12977.4 |
| lysr family transcriptional regulator | APR52_00875 | Not Available | Negative | 184884 - 185783 | 32735.9 |
| hypothetical protein | APR52_00880 | Not Available | Positive | 185914 - 186849 | 34279.5 |
| hypothetical protein | APR52_00885 | P76254 | Positive | 186852 - 187808 | 34126.6 |
| lysr family transcriptional regulator | APR52_00890 | Not Available | Negative | 187813 - 188712 | 32809.9 |
| amino acid abc transporter substrate-binding protein | APR52_00895 | P58068 | Positive | 189193 - 190209 | 36348.9 |
| amino acid abc transporter permease | APR52_00900 | Not Available | Positive | 190272 - 191462 | 42145.0 |
| amino acid abc transporter permease | APR52_00905 | P45768 | Positive | 191464 - 192570 | 40226.5 |
| hypothetical protein | APR52_00910 | P45769 | Positive | 192604 - 193344 | 28164.5 |
| methionine gamma-lyase | APR52_00915 | Not Available | Positive | 193380 - 194582 | 42986.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
