Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | APR52_15275 | Not Available | Negative | 3307309 - 3308307 | 36452.1 |
| peptide abc transporter atp-binding protein | APR52_15280 | Not Available | Negative | 3308304 - 3309362 | 38218.6 |
| peptide abc transporter permease | APR52_15285 | Not Available | Negative | 3309376 - 3310281 | 32039.9 |
| peptide abc transporter | APR52_15290 | Not Available | Negative | 3310308 - 3311243 | 33645.3 |
| peptide abc transporter permease | APR52_15295 | P55669 | Negative | 3311277 - 3312863 | 57286.7 |
| microcystin lr degradation protein mlrc-like protein | APR52_15300 | Q93CA6 | Negative | 3312928 - 3314379 | 51529.5 |
| fad-dependent oxidoreductase | APR52_15305 | Q9HXE3 | Negative | 3314438 - 3315604 | 41256.3 |
| xre family transcriptional regulator | APR52_15310 | Not Available | Positive | 3315852 - 3316562 | 25466.6 |
| hypothetical protein | APR52_15315 | Not Available | Positive | 3316582 - 3316893 | 11490.6 |
| cytochrome c | APR52_15320 | Q88FX8 | Positive | 3317050 - 3318357 | 45331.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
