Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_15225 | Not Available | Positive | 3298188 - 3299075 | 32111.9 |
| aspartate racemase | APR52_15230 | Not Available | Positive | 3299102 - 3299845 | 26215.7 |
| carboxymethylenebutenolidase | APR52_15235 | P71505 | Positive | 3299988 - 3300899 | 31897.8 |
| dihydroorotate dehydrogenase | APR52_15240 | Not Available | Positive | 3301025 - 3302008 | 34786.8 |
| hypothetical protein | APR52_15245 | Not Available | Positive | 3302180 - 3302371 | 6787.24 |
| lysr family transcriptional regulator | APR52_15250 | Not Available | Negative | 3302397 - 3303329 | 34141.8 |
| 3-oxoacyl-acp reductase | APR52_15255 | Q9LBG2 | Positive | 3303458 - 3304219 | 26318.7 |
| hypothetical protein | APR52_15260 | Not Available | Positive | 3304271 - 3305245 | 34464.9 |
| carboxymuconolactone decarboxylase | APR52_15265 | Not Available | Positive | 3305283 - 3305807 | 19362.2 |
| d-aminoacylase | APR52_15270 | Not Available | Negative | 3305823 - 3307274 | 52000.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
