Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_15175 | Not Available | Negative | 3286466 - 3287296 | 29343.6 |
| homoserine kinase | APR52_15180 | Not Available | Negative | 3287307 - 3288362 | 38691.4 |
| hypothetical protein | APR52_15185 | Not Available | Negative | 3288418 - 3288789 | 13027.3 |
| dna polymerase i | APR52_15190 | Q9HT80 | Positive | 3288897 - 3291719 | 102747.0 |
| hypothetical protein | APR52_15195 | Not Available | Positive | 3291716 - 3292816 | 40259.9 |
| glutamate carboxypeptidase | APR52_15200 | Not Available | Positive | 3292889 - 3294187 | 46191.7 |
| lysr family transcriptional regulator | APR52_15205 | P0A4T4 | Positive | 3294195 - 3295100 | 32534.9 |
| amino acid dehydrogenase | APR52_15210 | Q8XX54 | Negative | 3295228 - 3296448 | 42474.2 |
| hypothetical protein | APR52_15215 | Not Available | Negative | 3296583 - 3297236 | 22898.7 |
| hypothetical protein | APR52_15220 | Not Available | Negative | 3297233 - 3298015 | 27274.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
