Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbg | APR52_15125 | Not Available | Positive | 3277727 - 3278725 | 35682.9 |
| conjugal transfer protein trbi | APR52_15130 | P55406 | Positive | 3278728 - 3280011 | 44377.7 |
| hypothetical protein | APR52_15135 | Not Available | Positive | 3280008 - 3280253 | 8596.54 |
| hypothetical protein | APR52_15140 | Not Available | Positive | 3280449 - 3280628 | 6501.85 |
| Trna-lys | Not Available | Not Available | Positive | 3280780 - 3280855 | Not Available |
| short-chain dehydrogenase | APR52_15150 | Q3T0R4 | Positive | 3281012 - 3281716 | 24132.0 |
| Trna-ala | Not Available | Not Available | Positive | 3281775 - 3281850 | Not Available |
| esterase | APR52_15160 | A0A0G3FWY4 | Positive | 3281947 - 3282816 | 31751.0 |
| gmp reductase | APR52_15165 | C5CT60 | Negative | 3282821 - 3283798 | 35382.7 |
| dna helicase ii | APR52_15170 | P03018 | Positive | 3284018 - 3286435 | 89564.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
