Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | APR52_15075 | Not Available | Positive | 3267941 - 3269998 | 74770.1 |
| copg family transcriptional regulator | APR52_15080 | Not Available | Positive | 3269995 - 3270504 | 19015.7 |
| conjugal transfer protein trbb | APR52_15085 | Not Available | Positive | 3270501 - 3271547 | 37145.7 |
| conjugal transfer protein trbc | APR52_15090 | Not Available | Positive | 3271544 - 3271876 | 11429.2 |
| conjugal transfer protein trbd | APR52_15095 | Not Available | Positive | 3271873 - 3272154 | 9824.13 |
| conjugal transfer protein trbe | APR52_15100 | Not Available | Positive | 3272164 - 3274623 | 90455.2 |
| conjugal transfer protein trbj | APR52_15105 | Not Available | Positive | 3274620 - 3275378 | 27561.8 |
| hypothetical protein | APR52_15110 | Not Available | Positive | 3275386 - 3275652 | 9493.54 |
| conjugal transfer protein trbl | APR52_15115 | Not Available | Positive | 3275649 - 3277013 | 45035.7 |
| conjugal transfer protein trbf | APR52_15120 | Not Available | Positive | 3277029 - 3277730 | 25995.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
