Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_15025 | Not Available | Positive | 3256259 - 3256864 | 22441.9 |
| pyruvate phosphate dikinase | APR52_15030 | Q59754 | Positive | 3256868 - 3258625 | 61774.6 |
| hypothetical protein | APR52_15035 | P51283 | Positive | 3259011 - 3259250 | 8550.4 |
| acetyl-coa carboxylase biotin carboxylase subunit | APR52_15040 | P49787 | Positive | 3259268 - 3260629 | 49155.8 |
| pyruvate carboxylase | APR52_15045 | Q58628 | Positive | 3260640 - 3262103 | 53644.1 |
| hypothetical protein | APR52_15050 | A7HXK5 | Positive | 3262346 - 3262891 | 19895.8 |
| 3-keto-5-aminohexanoate cleavage protein | APR52_15055 | Not Available | Positive | 3262888 - 3263829 | 34309.3 |
| hypothetical protein | APR52_15060 | P52693 | Negative | 3263871 - 3264749 | 32437.2 |
| abc transporter permease | APR52_15065 | Q8YDV4 | Positive | 3265043 - 3266314 | 45831.9 |
| hypothetical protein | APR52_15070 | Not Available | Positive | 3266687 - 3267601 | 33350.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
