Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(fad)-utilizing dehydrogenase | APR52_14870 | Not Available | Negative | 3221520 - 3222761 | 43070.8 |
| dna helicase uvrd | APR52_14875 | B1I493 | Negative | 3222758 - 3226021 | 119012.0 |
| exonuclease | APR52_14880 | Not Available | Negative | 3226018 - 3228603 | 93434.8 |
| thioredoxin | APR52_14885 | Q9X2T1 | Positive | 3228761 - 3229093 | 12029.6 |
| transcription termination factor rho | APR52_14890 | Q7NXP1 | Positive | 3229282 - 3230547 | 47428.9 |
| oxidoreductase | APR52_14895 | P77376 | Negative | 3230614 - 3231681 | 38378.9 |
| 50s ribosomal protein l31 type b | APR52_14900 | B2T3R7 | Positive | 3231820 - 3232092 | 10038.8 |
| hypothetical protein | APR52_14905 | Not Available | Positive | 3232186 - 3233949 | 64365.4 |
| mate family efflux transporter | APR52_14910 | Q5NYX9 | Positive | 3233946 - 3235292 | 47397.4 |
| histidine kinase | APR52_14915 | P08400 | Negative | 3235323 - 3236666 | 49234.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
