Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacylglutathione hydrolase | APR52_14820 | Q21YF8 | Positive | 3210766 - 3211545 | 27883.1 |
| lytic transglycosylase | APR52_14825 | P0AEZ8 | Positive | 3211542 - 3213068 | 55684.7 |
| potassium transporter | APR52_14830 | P44933 | Positive | 3213151 - 3214917 | 61846.9 |
| abc transporter permease | APR52_14835 | Not Available | Negative | 3214953 - 3215792 | 30461.8 |
| mannosyltransferase | APR52_14840 | Not Available | Negative | 3215789 - 3216604 | 29807.0 |
| abc transporter substrate-binding protein | APR52_14845 | Not Available | Negative | 3216679 - 3217713 | 36164.7 |
| glutathione metabolism protein | APR52_14850 | Not Available | Negative | 3217874 - 3218266 | 14149.5 |
| recombination protein recr | APR52_14855 | Q21YG1 | Negative | 3218316 - 3218906 | 21210.6 |
| nucleoid-associated protein | APR52_14860 | A2SIU9 | Negative | 3218931 - 3219263 | 11867.6 |
| dna polymerase iii subunit gamma/tau | APR52_14865 | P06710 | Negative | 3219388 - 3221247 | 66229.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
