Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase | APR52_00820 | Not Available | Positive | 171791 - 172624 | 30985.7 |
| glutathione s-transferase | APR52_00825 | Not Available | Negative | 172621 - 173232 | 22822.4 |
| s-transferase | APR52_00830 | Not Available | Negative | 173239 - 174117 | 32144.9 |
| transcriptional regulator | APR52_00835 | Not Available | Negative | 174234 - 175166 | 34519.5 |
| rnd transporter mfp subunit | APR52_00840 | Q6D2B2 | Positive | 175378 - 176571 | 41907.8 |
| transporter | APR52_00845 | Q8G2M6 | Positive | 176568 - 179774 | 114578.0 |
| rnd transporter | APR52_00850 | Not Available | Positive | 179771 - 181282 | 53523.3 |
| nadh:flavin oxidoreductase | APR52_00855 | P54524 | Positive | 181356 - 182378 | 37023.2 |
| transcriptional regulator | APR52_00860 | Not Available | Negative | 182394 - 183305 | 33638.4 |
| lysr family transcriptional regulator | APR52_00865 | Not Available | Negative | 183329 - 184315 | 36142.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
