Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR52_14770 | O28881 | Negative | 3200962 - 3201690 | 26876.5 |
| abc transporter permease | APR52_14775 | Not Available | Negative | 3201687 - 3202781 | 38684.0 |
| abc transporter permease | APR52_14780 | Not Available | Negative | 3202815 - 3203681 | 29862.7 |
| urea abc transporter substrate-binding protein | APR52_14785 | Not Available | Negative | 3203720 - 3204943 | 45021.4 |
| amidase | APR52_14790 | P63497 | Negative | 3205009 - 3206409 | 49393.1 |
| amidase | APR52_14795 | C1DQ37 | Negative | 3206561 - 3207973 | 50132.0 |
| hypothetical protein | APR52_14800 | Not Available | Negative | 3208035 - 3208274 | 8088.5 |
| hypothetical protein | APR52_14805 | Not Available | Negative | 3208399 - 3209394 | 37219.3 |
| ribonuclease h | APR52_14810 | A1WFG9 | Negative | 3209493 - 3209942 | 16490.7 |
| methyltransferase type 11 | APR52_14815 | Not Available | Negative | 3209982 - 3210746 | 28986.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
