Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | APR52_14720 | P53652 | Negative | 3190522 - 3191172 | 23143.3 |
| hypothetical protein | APR52_14725 | Not Available | Positive | 3191359 - 3192066 | 25113.8 |
| cyclic pyranopterin phosphate synthase moaa | APR52_14730 | Q8Y0K4 | Positive | 3192180 - 3193325 | 41591.0 |
| molybdenum cofactor biosynthesis protein moaa | APR52_14735 | Not Available | Positive | 3193334 - 3194647 | 45926.6 |
| abc transporter substrate-binding protein | APR52_14740 | Not Available | Negative | 3194649 - 3195617 | 33469.2 |
| hypothetical protein | APR52_14745 | Not Available | Negative | 3195670 - 3196923 | 46284.9 |
| carnitine dehydratase | APR52_14750 | Not Available | Negative | 3196949 - 3198160 | 42800.9 |
| lysr family transcriptional regulator | APR52_14755 | Not Available | Positive | 3198257 - 3199240 | 35214.0 |
| acetamidase | APR52_14760 | Not Available | Negative | 3199247 - 3200236 | 36206.4 |
| abc transporter atp-binding protein | APR52_14765 | Not Available | Negative | 3200262 - 3200957 | 25033.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
