Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_14670 | Not Available | Negative | 3180531 - 3180791 | 9064.9 |
| hypothetical protein | APR52_14675 | Not Available | Negative | 3180778 - 3181149 | 13580.9 |
| hypothetical protein | APR52_14680 | Not Available | Negative | 3181167 - 3182102 | 34786.2 |
| 3-oxoacyl-acp synthase | APR52_14685 | Not Available | Negative | 3182089 - 3184014 | 70770.9 |
| fatty acid desaturase | APR52_14690 | Not Available | Negative | 3184018 - 3184941 | 36135.9 |
| desaturase | APR52_14695 | Not Available | Negative | 3184925 - 3185719 | 30203.6 |
| phospholipase | APR52_14700 | Q9ZMP2 | Negative | 3185729 - 3187312 | 57892.3 |
| peroxiredoxin | APR52_14705 | Not Available | Positive | 3187479 - 3188042 | 19719.4 |
| aldehyde dehydrogenase | APR52_14710 | O34660 | Positive | 3188085 - 3189518 | 51115.9 |
| divalent cation transporter | APR52_14715 | Q06916 | Negative | 3189593 - 3190483 | 30377.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
