Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_14620 | Not Available | Positive | 3169175 - 3169807 | 23399.7 |
| inorganic pyrophosphatase | APR52_14625 | P57918 | Negative | 3169841 - 3170368 | 19403.5 |
| pyrophosphatase | APR52_14630 | Q8KY01 | Positive | 3170632 - 3173136 | 84612.9 |
| transporter | APR52_14635 | Not Available | Positive | 3173310 - 3174749 | 51644.0 |
| hypothetical protein | APR52_14640 | Not Available | Positive | 3174750 - 3175736 | 35486.6 |
| abc transporter | APR52_14645 | Not Available | Positive | 3175740 - 3176924 | 41970.6 |
| abc transporter | APR52_14650 | Not Available | Positive | 3176924 - 3178072 | 41349.1 |
| tetr family transcriptional regulator | APR52_14655 | Not Available | Negative | 3178069 - 3178695 | 22693.1 |
| metal-dependent hydrolase | APR52_14660 | Not Available | Positive | 3178825 - 3179676 | 32512.6 |
| hypothetical protein | APR52_14665 | Not Available | Negative | 3179687 - 3180274 | 21775.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
