Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-70 | APR52_14570 | Not Available | Positive | 3161306 - 3161872 | 21469.3 |
| hypothetical protein | APR52_14575 | Not Available | Positive | 3161869 - 3162297 | 14762.5 |
| hypothetical protein | APR52_14580 | Not Available | Positive | 3162373 - 3163320 | 32683.8 |
| hypothetical protein | APR52_14585 | Not Available | Positive | 3163333 - 3163896 | 21367.1 |
| diacylglycerol kinase | APR52_14590 | P0ABN3 | Positive | 3163893 - 3164300 | 14748.2 |
| log family protein | APR52_14595 | P48636 | Positive | 3164332 - 3164922 | 21537.9 |
| transcriptional regulator | APR52_14600 | Q9CJK1 | Negative | 3164967 - 3165305 | 12362.0 |
| nad synthetase | APR52_14605 | Q9PC24 | Negative | 3165302 - 3166993 | 60748.8 |
| hypothetical protein | APR52_14610 | Not Available | Positive | 3166974 - 3168179 | 44942.9 |
| hypothetical protein | APR52_14615 | Not Available | Positive | 3168265 - 3169017 | 27369.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
