Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | APR52_14520 | Q21VY7 | Positive | 3149140 - 3149895 | 27624.1 |
| arginyl-trna-protein transferase | APR52_14525 | C5CYP5 | Positive | 3149892 - 3150641 | 28602.2 |
| iclr family transcriptional regulator | APR52_14530 | P44996 | Positive | 3150672 - 3151511 | 30144.2 |
| d-alanyl-d-alanine carboxypeptidase | APR52_14535 | P72161 | Negative | 3151609 - 3152784 | 42002.6 |
| 2-isopropylmalate synthase | APR52_14540 | C5CYP2 | Negative | 3152902 - 3154440 | 55127.3 |
| 2-isopropylmalate synthase | APR52_14545 | A7HP03 | Negative | 3154491 - 3156197 | 62559.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | APR52_14550 | Q48269 | Negative | 3156423 - 3157247 | 30194.8 |
| ketol-acid reductoisomerase | APR52_14555 | C5CYN9 | Negative | 3157429 - 3158445 | 36680.0 |
| acetolactate synthase | APR52_14560 | P00894 | Negative | 3158592 - 3159083 | 18060.0 |
| acetolactate synthase 3 catalytic subunit | APR52_14565 | Not Available | Negative | 3159225 - 3161009 | 65431.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
