Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | APR52_14470 | Not Available | Positive | 3137085 - 3139034 | 69812.3 |
| hypothetical protein | APR52_14475 | Not Available | Negative | 3139050 - 3139406 | 12529.6 |
| peptidase | APR52_14480 | Q2SL36 | Negative | 3139441 - 3140916 | 51090.1 |
| histidine kinase | APR52_14485 | Q9HV31 | Negative | 3141017 - 3142348 | 47551.7 |
| two-component system response regulator | APR52_14490 | Not Available | Negative | 3142372 - 3143031 | 24539.8 |
| iclr family transcriptional regulator | APR52_14495 | O83046 | Negative | 3143087 - 3143857 | 28034.9 |
| 4-hydroxybenzoate 3-monooxygenase | APR52_14500 | P20586 | Positive | 3143988 - 3145169 | 43663.8 |
| polyketide cyclase | APR52_14505 | Not Available | Negative | 3145139 - 3145567 | 15563.4 |
| transcriptional regulator | APR52_14510 | Q51872 | Negative | 3145617 - 3146534 | 32950.1 |
| carbon monoxide dehydrogenase | APR52_14515 | Q4J6M3 | Negative | 3146572 - 3148902 | 82031.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
