Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate diphosphorylase | APR52_14420 | Q9JXF7 | Positive | 3128834 - 3129727 | 31259.2 |
| tonb-dependent receptor | APR52_14425 | A0A0H2ZI93 | Positive | 3129739 - 3131880 | 78661.2 |
| Trna-asn | Not Available | Not Available | Positive | 3131949 - 3132024 | Not Available |
| hypothetical protein | APR52_14435 | Not Available | Positive | 3132391 - 3132660 | 9672.55 |
| hypothetical protein | APR52_14440 | Not Available | Positive | 3132719 - 3132943 | 8110.79 |
| hypothetical protein | APR52_14445 | Not Available | Negative | 3133078 - 3133311 | 7672.99 |
| peptidoglycan-binding protein | APR52_14450 | Not Available | Positive | 3133876 - 3134766 | 29963.7 |
| aldehyde-activating protein | APR52_14455 | Not Available | Negative | 3134829 - 3135233 | 14781.5 |
| dna-binding transcriptional regulator | APR52_14460 | Not Available | Positive | 3135329 - 3136291 | 35428.6 |
| luxr family transcriptional regulator | APR52_14465 | Not Available | Positive | 3136391 - 3137143 | 26656.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
