Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR52_14370 | P50324 | Negative | 3118022 - 3118966 | 34863.9 |
| hypothetical protein | APR52_14375 | Not Available | Positive | 3119112 - 3120053 | 33138.7 |
| phenoxybenzoate dioxygenase | APR52_14380 | Not Available | Positive | 3120050 - 3121276 | 45592.0 |
| vanillate o-demethylase oxidoreductase | APR52_14385 | Not Available | Positive | 3121273 - 3122247 | 34139.0 |
| guanylate cyclase | APR52_14390 | P19485 | Negative | 3122244 - 3124178 | 70876.5 |
| allantoin permease | APR52_14395 | Not Available | Positive | 3124457 - 3125797 | 46618.6 |
| phosphomethylpyrimidine kinase | APR52_14400 | P56904 | Negative | 3125736 - 3126590 | 29047.3 |
| glycine oxidase | APR52_14405 | O34292 | Positive | 3126635 - 3127720 | 38840.2 |
| thiamine biosynthesis protein this | APR52_14410 | Not Available | Positive | 3127726 - 3127923 | 7012.44 |
| thiazole synthase | APR52_14415 | C5CJH0 | Positive | 3127947 - 3128762 | 29057.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
