Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_14320 | Not Available | Negative | 3108754 - 3109047 | 10728.9 |
| nitrite reductase | APR52_14325 | Not Available | Positive | 3109312 - 3111090 | 66013.1 |
| hypothetical protein | APR52_14330 | Not Available | Positive | 3111087 - 3111482 | 14486.0 |
| phosphoadenylylsulfate reductase | APR52_14335 | Q87L92 | Positive | 3111510 - 3112130 | 23189.5 |
| sulfate adenylyltransferase | APR52_14340 | Q9X5U0 | Positive | 3112171 - 3113112 | 35620.3 |
| sulfate adenylyltransferase | APR52_14345 | C1D890 | Positive | 3113112 - 3114452 | 47773.9 |
| ferredoxin | APR52_14350 | P0A122 | Positive | 3114495 - 3114824 | 12072.4 |
| ferredoxin-nadp reductase | APR52_14355 | A4SVT8 | Positive | 3114782 - 3115852 | 37565.2 |
| glutamate-1-semialdehyde 2,1-aminomutase | APR52_14360 | H8WR05 | Negative | 3115860 - 3117164 | 46144.4 |
| tetr family transcriptional regulator | APR52_14365 | Not Available | Positive | 3117286 - 3118035 | 26922.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
