Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter permease | APR52_00770 | O69053 | Negative | 162090 - 162875 | 28271.2 |
| phosphonate abc transporter atp-binding protein | APR52_00775 | Q3SGJ8 | Negative | 162911 - 163717 | 28858.9 |
| phosphonate abc transporter substrate-binding protein | APR52_00780 | O69052 | Negative | 163714 - 164457 | 26588.9 |
| lysr family transcriptional regulator | APR52_00785 | P42427 | Positive | 164741 - 165628 | 32740.4 |
| amidohydrolase | APR52_00790 | Not Available | Positive | 165757 - 167277 | 56828.4 |
| nitrate abc transporter substrate-binding protein | APR52_00795 | Not Available | Positive | 167274 - 168356 | 38919.3 |
| sulfonate abc transporter | APR52_00800 | Not Available | Positive | 168353 - 169192 | 30348.7 |
| taurine abc transporter permease | APR52_00805 | Not Available | Positive | 169189 - 170010 | 29319.4 |
| sulfonate abc transporter atp-binding protein | APR52_00810 | Q81C68 | Positive | 170031 - 170882 | 31018.5 |
| arac family transcriptional regulator | APR52_00815 | Not Available | Negative | 170908 - 171678 | 28332.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
