Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stationary phase survival protein sure | APR52_14270 | C5CUL9 | Positive | 3100725 - 3101483 | 27083.2 |
| protein-l-isoaspartate o-methyltransferase | APR52_14275 | A2SF76 | Positive | 3101485 - 3102276 | 27628.8 |
| peptidase | APR52_14280 | Not Available | Positive | 3102288 - 3103202 | 31394.1 |
| rna polymerase sigma factor rpos | APR52_14285 | P45684 | Positive | 3103207 - 3104220 | 37231.0 |
| 23s rrna methyltransferase | APR52_14290 | A1TSE0 | Positive | 3104272 - 3105720 | 53444.3 |
| hypothetical protein | APR52_14295 | Q9KSA1 | Negative | 3105811 - 3106512 | 24739.9 |
| hypothetical protein | APR52_14300 | P0AEQ2 | Positive | 3106693 - 3107100 | 13808.7 |
| hemin transporter hemp | APR52_14305 | Not Available | Negative | 3107302 - 3107514 | 7416.09 |
| biopolymer transporter exbd | APR52_14310 | O06434 | Negative | 3107610 - 3108023 | 15304.4 |
| biopolymer transporter | APR52_14315 | Not Available | Negative | 3108029 - 3108742 | 25445.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
