Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR52_13815 | Not Available | Positive | 3025256 - 3026170 | 33219.7 |
| tartrate dehydrogenase | APR52_13820 | Not Available | Positive | 3026167 - 3027252 | 39431.2 |
| dna-binding protein hu | APR52_13825 | P64388 | Positive | 3027485 - 3027757 | 9458.64 |
| Trna-val | Not Available | Not Available | Positive | 3027796 - 3027871 | Not Available |
| peptidylprolyl isomerase | APR52_13835 | Q7W5E0 | Positive | 3027948 - 3029867 | 69717.5 |
| phosphoglycerate kinase | APR52_13840 | Not Available | Positive | 3029982 - 3030656 | 25108.8 |
| hypothetical protein | APR52_13845 | Not Available | Negative | 3030672 - 3031004 | 12833.4 |
| hypothetical protein | APR52_13850 | Not Available | Negative | 3031029 - 3031277 | 8412.58 |
| phosphatidylethanolamine-binding protein | APR52_13855 | O26373 | Positive | 3031481 - 3032137 | 22845.0 |
| Trna-his | Not Available | Not Available | Positive | 3032215 - 3032290 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
