Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | APR52_13765 | Not Available | Positive | 3013396 - 3014103 | 25901.4 |
| 3-isopropylmalate dehydrogenase | APR52_13770 | Not Available | Negative | 3014125 - 3014991 | 32290.6 |
| elongation factor p | APR52_13775 | C5CUK1 | Negative | 3015100 - 3015654 | 20698.8 |
| hypothetical protein | APR52_13780 | Q88LS1 | Negative | 3015827 - 3016966 | 41732.6 |
| peptidase m20 | APR52_13785 | P27614 | Positive | 3017043 - 3018482 | 52296.8 |
| gamma-glutamyltransferase | APR52_13790 | P54422 | Negative | 3018507 - 3020558 | 70183.3 |
| excinuclease abc subunit c | APR52_13795 | Q21W87 | Positive | 3020705 - 3022690 | 72958.3 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | APR52_13800 | Q57N57 | Positive | 3022774 - 3023340 | 21064.5 |
| peptide abc transporter atp-binding protein | APR52_13805 | Not Available | Positive | 3023337 - 3024221 | 31054.9 |
| lysr family transcriptional regulator | APR52_13810 | Not Available | Negative | 3024238 - 3025185 | 34725.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
