Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_13615 | Q2YKQ9 | Positive | 2980803 - 2981987 | 42074.9 |
| abc transporter permease | APR52_13620 | Not Available | Positive | 2982138 - 2983010 | 30922.3 |
| abc transporter permease | APR52_13625 | Not Available | Positive | 2983010 - 2983996 | 34927.9 |
| abc transporter atp-binding protein | APR52_13630 | Not Available | Positive | 2983993 - 2984763 | 27688.6 |
| abc transporter atp-binding protein | APR52_13635 | Not Available | Positive | 2984756 - 2985460 | 25177.6 |
| feruloyl esterase | APR52_13640 | Not Available | Positive | 2985503 - 2987221 | 60520.1 |
| antibiotic biosynthesis monooxygenase | APR52_13645 | Not Available | Positive | 2987332 - 2987631 | 11271.6 |
| protein-disulfide isomerase | APR52_13650 | Not Available | Negative | 2987635 - 2988348 | 24984.7 |
| mbl fold metallo-hydrolase | APR52_13655 | Not Available | Negative | 2988336 - 2989220 | 31492.8 |
| lysr family transcriptional regulator | APR52_13660 | Not Available | Negative | 2989342 - 2990247 | 32896.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
