Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_13565 | P0AFQ4 | Negative | 2969602 - 2970732 | 40718.0 |
| abc transporter atp-binding protein | APR52_13570 | P0A9U1 | Negative | 2970729 - 2972501 | 64609.9 |
| hypothetical protein | APR52_13575 | Q9L9D4 | Negative | 2972498 - 2973514 | 36366.6 |
| tetr family transcriptional regulator | APR52_13580 | Not Available | Positive | 2973608 - 2974354 | 26452.2 |
| phospholipase | APR52_13585 | C6DGY3 | Negative | 2974332 - 2975711 | 50826.3 |
| glutathione s-transferase | APR52_13590 | Not Available | Negative | 2975758 - 2976423 | 24604.6 |
| methionine synthase | APR52_13595 | P42319 | Negative | 2976451 - 2977572 | 41766.8 |
| rieske (2fe-2s) protein | APR52_13600 | P12609 | Positive | 2977729 - 2978835 | 41511.2 |
| gntr family transcriptional regulator | APR52_13605 | Not Available | Positive | 2978832 - 2979608 | 27857.6 |
| diguanylate cyclase | APR52_13610 | Not Available | Positive | 2979644 - 2980639 | 35080.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
