Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_00720 | P71864 | Positive | 148423 - 150123 | 60965.4 |
| histidine kinase | APR52_00725 | P55183 | Negative | 150105 - 151934 | 66301.8 |
| oxalate/formate mfs antiporter | APR52_00730 | Not Available | Positive | 152218 - 153549 | 47727.0 |
| luxr family transcriptional regulator | APR52_00735 | Not Available | Negative | 153608 - 154357 | 27071.7 |
| isocitrate dehydrogenase | APR52_00740 | P16100 | Positive | 154593 - 156830 | 82516.3 |
| hypothetical protein | APR52_00745 | Not Available | Positive | 156857 - 157201 | 11320.6 |
| hypothetical protein | APR52_00750 | F2R776 | Negative | 157214 - 158713 | 54011.4 |
| transcriptional regulator | APR52_00755 | A0A0H2ZIC3 | Negative | 158716 - 159732 | 36138.2 |
| thiamine biosynthesis protein thij | APR52_00760 | Not Available | Positive | 159773 - 160918 | 40304.4 |
| alcohol dehydrogenase | APR52_00765 | D9XF45 | Negative | 160919 - 162016 | 38809.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
