Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_13515 | Not Available | Negative | 2957796 - 2958095 | 9886.02 |
| hypothetical protein | APR52_13520 | Q05840 | Positive | 2958199 - 2959086 | 31686.5 |
| glucokinase | APR52_13525 | Not Available | Positive | 2959237 - 2960280 | 38699.7 |
| multidrug mfs transporter | APR52_13530 | P76269 | Negative | 2960281 - 2961672 | 47511.2 |
| mfs transporter | APR52_13535 | Not Available | Negative | 2961801 - 2962754 | 32944.0 |
| hypothetical protein | APR52_13540 | Not Available | Negative | 2962811 - 2963935 | 41808.5 |
| lysr family transcriptional regulator | APR52_13545 | O87883 | Positive | 2964029 - 2964928 | 32653.1 |
| hypothetical protein | APR52_13550 | Not Available | Negative | 2964936 - 2966687 | 61663.7 |
| rnd transporter | APR52_13555 | Q8CWA4 | Negative | 2966914 - 2968437 | 53888.6 |
| antibiotic abc transporter permease | APR52_13560 | P0AFQ0 | Negative | 2968470 - 2969588 | 40164.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
