Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein kinase | APR52_13460 | Not Available | Positive | 2943823 - 2945124 | 46525.7 |
| pseudouridine synthase | APR52_13465 | Q09709 | Positive | 2945121 - 2946053 | 34754.1 |
| 3-oxoacyl-acp reductase | APR52_13470 | Q9RPT1 | Positive | 2946149 - 2946925 | 26907.1 |
| metal-dependent hydrolase | APR52_13475 | Not Available | Negative | 2947559 - 2948563 | 36747.3 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | APR52_13480 | Not Available | Negative | 2948619 - 2949410 | 29049.2 |
| histidinol phosphate phosphatase | APR52_13485 | Q7WG29 | Negative | 2949410 - 2950006 | 21385.8 |
| glycine--trna ligase subunit beta | APR52_13490 | A1TUT0 | Negative | 2950053 - 2952185 | 75528.4 |
| glycine--trna ligase subunit alpha | APR52_13495 | C5CM90 | Negative | 2952201 - 2953109 | 34368.8 |
| mfs transporter | APR52_13505 | Not Available | Negative | 2954006 - 2955202 | 40392.9 |
| amino acid abc transporter permease | APR52_13510 | Q8ZPK3 | Negative | 2956196 - 2957749 | 55027.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
