Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_13410 | P54302 | Negative | 2931297 - 2933156 | 66517.0 |
| luxr family transcriptional regulator | APR52_13415 | Not Available | Positive | 2933302 - 2934045 | 27864.3 |
| indole acetimide hydrolase | APR52_13420 | Q84DC4 | Negative | 2934047 - 2935501 | 49316.6 |
| acyl-coa dehydrogenase | APR52_13425 | P15651 | Negative | 2935692 - 2936819 | 40143.9 |
| carboxypeptidase | APR52_13430 | Not Available | Negative | 2936851 - 2938098 | 43977.6 |
| acetyl-coa acetyltransferase | APR52_13435 | P45359 | Negative | 2938185 - 2939369 | 41007.8 |
| isocitrate dehydrogenase | APR52_13440 | A1TVC1 | Negative | 2939517 - 2941337 | 70647.5 |
| carbonate dehydratase | APR52_13445 | Not Available | Negative | 2941360 - 2942082 | 26427.6 |
| merr family transcriptional regulator | APR52_13450 | Not Available | Negative | 2942141 - 2942584 | 16411.8 |
| zn-dependent hydrolase | APR52_13455 | Not Available | Positive | 2942711 - 2943772 | 39775.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
