Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_13310 | Not Available | Negative | 2910497 - 2910886 | 14528.6 |
| ethyl tert-butyl ether degradation protein ethd | APR52_13315 | Not Available | Positive | 2910996 - 2911310 | 11407.8 |
| hypothetical protein | APR52_13320 | Not Available | Negative | 2911357 - 2912337 | 35751.2 |
| 3-methylcrotonyl-coa carboxylase | APR52_13325 | Q99MR8 | Negative | 2912456 - 2914456 | 71692.6 |
| hypothetical protein | APR52_13330 | Not Available | Negative | 2914449 - 2915120 | 23318.9 |
| enoyl-coa hydratase | APR52_13335 | Not Available | Negative | 2915137 - 2915937 | 28144.8 |
| methylcrotonoyl-coa carboxylase | APR52_13340 | Not Available | Negative | 2915951 - 2917558 | 57145.5 |
| amp-binding protein | APR52_13345 | O31826 | Negative | 2917601 - 2919274 | 61682.4 |
| isovaleryl-coa dehydrogenase | APR52_13350 | Q75IM9 | Negative | 2919330 - 2920502 | 42391.7 |
| arac family transcriptional regulator | APR52_13355 | Not Available | Positive | 2920644 - 2921720 | 40129.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
