Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyquinol 1,2-dioxygenase | APR52_13260 | Q8NL92 | Positive | 2901178 - 2902092 | 33121.1 |
| citrate synthase | APR52_13265 | Not Available | Positive | 2902089 - 2902895 | 27793.5 |
| hypothetical protein | APR52_13270 | Not Available | Positive | 2902892 - 2903842 | 33024.0 |
| hypothetical protein | APR52_13275 | Not Available | Positive | 2903851 - 2904855 | 36035.7 |
| acyl-coa dehydrogenase | APR52_13280 | Not Available | Negative | 2904859 - 2906028 | 42502.2 |
| acetyl-coa acetyltransferase | APR52_13285 | Not Available | Negative | 2906025 - 2907260 | 43714.4 |
| abc transporter substrate-binding protein | APR52_13290 | Not Available | Negative | 2907257 - 2908267 | 35192.9 |
| cupin | APR52_13295 | Not Available | Negative | 2908293 - 2908685 | 14252.0 |
| iclr family transcriptional regulator | APR52_13300 | Not Available | Negative | 2908682 - 2909431 | 27487.4 |
| glyoxylate/hydroxypyruvate reductase a | APR52_13305 | A8GD46 | Negative | 2909522 - 2910442 | 33967.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
