Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein dsba | APR52_13210 | Not Available | Negative | 2890580 - 2891224 | 23501.1 |
| fe-s oxidoreductase | APR52_13215 | Not Available | Negative | 2891221 - 2891484 | 9786.59 |
| cys-trna(pro)/cys-trna(cys) deacylase | APR52_13220 | Not Available | Negative | 2891481 - 2891981 | 17686.3 |
| nitrite reductase | APR52_13225 | Q06458 | Positive | 2892375 - 2894903 | 91200.7 |
| acyltransferase | APR52_13230 | P0A9I9 | Positive | 2894927 - 2895268 | 12068.4 |
| formate transporter | APR52_13235 | P43756 | Positive | 2895318 - 2896130 | 28781.1 |
| protein kinase | APR52_13240 | Q81WH6 | Positive | 2896141 - 2897883 | 63124.5 |
| hydroxymethylglutaryl-coa lyase | APR52_13245 | Q9I2A0 | Negative | 2897890 - 2898810 | 32515.1 |
| lysr family transcriptional regulator | APR52_13250 | P27111 | Negative | 2898946 - 2899851 | 33348.7 |
| carnitine dehydratase | APR52_13255 | K3VD64 | Positive | 2899989 - 2901137 | 41953.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
