Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_13160 | Not Available | Negative | 2873390 - 2874364 | 34654.9 |
| acetylpolyamine aminohydrolase | APR52_13165 | Q9I3T5 | Negative | 2874468 - 2875508 | 37114.7 |
| ornithine cyclodeaminase | APR52_13170 | Q88H32 | Negative | 2875552 - 2876601 | 37878.5 |
| n-acyl-l-amino acid amidohydrolase | APR52_13175 | P37112 | Negative | 2876746 - 2877918 | 41881.8 |
| abc transporter substrate-binding protein | APR52_13180 | Not Available | Negative | 2877963 - 2878949 | 34413.1 |
| hypothetical protein | APR52_13185 | Not Available | Positive | 2879063 - 2880013 | 33498.9 |
| excinuclease abc subunit a | APR52_13190 | O26543 | Negative | 2880018 - 2885813 | 209515.0 |
| amino acid abc transporter substrate-binding protein | APR52_13195 | Not Available | Positive | 2885993 - 2887111 | 38918.2 |
| amino acid abc transporter substrate-binding protein | APR52_13200 | Not Available | Positive | 2887276 - 2888397 | 39364.6 |
| mfs transporter | APR52_13205 | P0C0L8 | Negative | 2888710 - 2890404 | 60544.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
