Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein pqqe | APR52_13110 | Q608P0 | Positive | 2863015 - 2864172 | 42771.1 |
| peptide chain release factor 3 | APR52_13115 | Q7WDS1 | Positive | 2864251 - 2865879 | 60245.3 |
| hypothetical protein | APR52_13120 | Not Available | Positive | 2865923 - 2866576 | 23517.6 |
| abc transporter permease | APR52_13125 | Not Available | Negative | 2866573 - 2867388 | 29219.3 |
| abc transporter permease | APR52_13130 | Not Available | Negative | 2867396 - 2868241 | 30122.6 |
| abc transporter | APR52_13135 | P32010 | Negative | 2868238 - 2869245 | 37129.9 |
| had family hydrolase | APR52_13140 | Not Available | Positive | 2869360 - 2870202 | 29937.5 |
| mfs transporter | APR52_13145 | Not Available | Negative | 2870199 - 2871452 | 42330.2 |
| tetr family transcriptional regulator | APR52_13150 | Not Available | Positive | 2871562 - 2872155 | 21156.2 |
| addiction module protein | APR52_13155 | Q9K0V1 | Negative | 2872163 - 2873266 | 40911.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
