Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | APR52_13060 | C5CM29 | Negative | 2854477 - 2855916 | 51985.4 |
| hypothetical protein | APR52_13065 | Not Available | Positive | 2856210 - 2856878 | 23425.5 |
| phasin | APR52_13070 | Not Available | Positive | 2857077 - 2857571 | 17719.3 |
| hypothetical protein | APR52_13075 | Not Available | Positive | 2857637 - 2858056 | 15109.2 |
| poly-beta-hydroxybutyrate polymerase | APR52_13080 | I3R9Z4 | Positive | 2858053 - 2859129 | 40187.7 |
| acetyltransferase | APR52_13085 | Not Available | Positive | 2859126 - 2859743 | 22209.7 |
| hypothetical protein | APR52_13090 | Not Available | Negative | 2859719 - 2860702 | 34857.3 |
| pyrroloquinoline quinone biosynthesis protein pqqb | APR52_13095 | A1K4P9 | Positive | 2861040 - 2861960 | 32527.9 |
| pyrroloquinoline quinone biosynthesis protein pqqc | APR52_13100 | B7VAB8 | Positive | 2862000 - 2862746 | 27685.9 |
| pyrroloquinoline quinone biosynthesis protein pqqd | APR52_13105 | B7VAB7 | Positive | 2862743 - 2863018 | 10102.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
