Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_00670 | Not Available | Negative | 136059 - 136547 | 16558.1 |
| marr family transcriptional regulator | APR52_00675 | Not Available | Positive | 136786 - 137202 | 15347.4 |
| hypothetical protein | APR52_00680 | Not Available | Positive | 137297 - 137599 | 11380.9 |
| hypothetical protein | APR52_00685 | Not Available | Negative | 137620 - 140847 | 111308.0 |
| hypothetical protein | APR52_00690 | Not Available | Negative | 140962 - 142800 | 65686.0 |
| hypothetical protein | APR52_00695 | O07528 | Negative | 142804 - 143442 | 22602.2 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_00700 | Not Available | Negative | 143562 - 144770 | 43999.5 |
| hypothetical protein | APR52_00705 | Not Available | Positive | 144964 - 146181 | 44726.5 |
| coa-transferase | APR52_00710 | Not Available | Positive | 146178 - 147398 | 42592.4 |
| nadph:quinone oxidoreductase | APR52_00715 | O94564 | Positive | 147404 - 148387 | 34513.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
