Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m23 | APR52_13010 | P44693 | Positive | 2845332 - 2846681 | 47771.1 |
| anhydro-n-acetylmuramic acid kinase | APR52_13015 | C5CM20 | Positive | 2846744 - 2847874 | 38690.2 |
| emrb/qaca subfamily drug resistance transporter | APR52_13020 | A8GHR1 | Negative | 2847876 - 2849318 | 50401.3 |
| iron-sulfur cluster insertion protein erpa | APR52_13025 | A1TUF2 | Negative | 2849407 - 2849772 | 12923.1 |
| 30s ribosomal protein s9 | APR52_13030 | C5CM23 | Negative | 2849976 - 2850368 | 14283.3 |
| 50s ribosomal protein l13 | APR52_13035 | C5CM24 | Negative | 2850381 - 2850809 | 15622.1 |
| competence protein comj | APR52_13040 | P37634 | Positive | 2851166 - 2852116 | 34117.0 |
| hypothetical protein | APR52_13045 | Q55752 | Negative | 2852122 - 2852757 | 22500.8 |
| 5,10-methylenetetrahydrofolate reductase | APR52_13050 | P11003 | Negative | 2852844 - 2853668 | 29685.4 |
| hemolysin | APR52_13055 | P9WJ62 | Negative | 2853679 - 2854467 | 28068.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
