Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase | APR52_12960 | Not Available | Positive | 2837414 - 2838499 | 38924.5 |
| atp-dependent dna helicase ruva | APR52_12965 | C5CM11 | Negative | 2838503 - 2839075 | 19828.4 |
| phosphate starvation-inducible protein phoh | APR52_12970 | P0A9K5 | Positive | 2839179 - 2840132 | 34781.1 |
| rrna maturation factor | APR52_12975 | A1VJK1 | Positive | 2840134 - 2840592 | 16999.3 |
| hypothetical protein | APR52_12980 | Not Available | Positive | 2840607 - 2841200 | 22003.2 |
| d-tyrosyl-trna(tyr) deacylase | APR52_12985 | C5CM14 | Negative | 2841219 - 2841659 | 15393.7 |
| cation diffusion facilitator family transporter | APR52_12990 | P74068 | Negative | 2841656 - 2842585 | 33424.7 |
| hypothetical protein | APR52_12995 | Not Available | Positive | 2842736 - 2843248 | 17378.0 |
| flagellar motor protein motb | APR52_13000 | Not Available | Positive | 2843248 - 2843877 | 22493.9 |
| tyrosine--trna ligase | APR52_13005 | Q475S5 | Negative | 2843941 - 2845173 | 44914.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
