Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_12910 | Not Available | Negative | 2823742 - 2824341 | 22153.1 |
| porin | APR52_12915 | Not Available | Positive | 2824627 - 2825691 | 37347.9 |
| 6-carboxyhexanoate--coa ligase | APR52_12920 | Not Available | Positive | 2825712 - 2827847 | 73224.9 |
| abc transporter substrate-binding protein | APR52_12925 | Not Available | Positive | 2827844 - 2828818 | 34076.7 |
| hypothetical protein | APR52_12930 | Not Available | Positive | 2828866 - 2830254 | 50055.4 |
| hypothetical protein | APR52_12935 | Not Available | Positive | 2830259 - 2831596 | 48518.9 |
| alkyl sulfatase | APR52_12940 | Not Available | Positive | 2831593 - 2832849 | 46433.3 |
| abc transporter substrate-binding protein | APR52_12945 | Not Available | Positive | 2832872 - 2833855 | 34868.2 |
| hypothetical protein | APR52_12950 | P43462 | Positive | 2833983 - 2834945 | 35401.0 |
| tyramine oxidase | APR52_12955 | P46883 | Positive | 2835018 - 2837321 | 84535.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
