Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase | APR52_12855 | Not Available | Negative | 2812265 - 2813134 | 33056.3 |
| cobalt transporter | APR52_12865 | Q54QU8 | Negative | 2814981 - 2815943 | 35194.1 |
| atp-dependent dna helicase ruvb | APR52_12870 | C5CM03 | Negative | 2815957 - 2817021 | 38972.0 |
| cdp-alcohol phosphatidyltransferase | APR52_12875 | P76090 | Positive | 2817202 - 2817846 | 22835.2 |
| hypothetical protein | APR52_12880 | P76092 | Positive | 2817843 - 2819648 | 66709.6 |
| phosphatase | APR52_12885 | P76093 | Positive | 2819657 - 2821021 | 50156.2 |
| hypothetical protein | APR52_12890 | Not Available | Positive | 2821014 - 2821454 | 15454.0 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | APR52_12895 | Not Available | Positive | 2821487 - 2822164 | 24384.8 |
| phosphatidate cytidylyltransferase | APR52_12900 | P76091 | Positive | 2822161 - 2823117 | 35057.6 |
| bacteriocin-protection protein | APR52_12905 | Not Available | Positive | 2823105 - 2823740 | 23270.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
