Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_12805 | Q57568 | Positive | 2800675 - 2803935 | 120563.0 |
| hypothetical protein | APR52_12810 | Not Available | Positive | 2803932 - 2805365 | 52960.8 |
| xre family transcriptional regulator | APR52_12815 | Not Available | Negative | 2805825 - 2806160 | 12002.7 |
| addiction module toxin rele | APR52_12820 | Not Available | Negative | 2806141 - 2806521 | 14079.1 |
| integrase | APR52_12825 | Not Available | Negative | 2806554 - 2807861 | 50057.0 |
| hypothetical protein | APR52_12830 | Not Available | Positive | 2809025 - 2809486 | 16850.2 |
| hypothetical protein | APR52_12835 | Not Available | Negative | 2809848 - 2810078 | 8656.42 |
| hypothetical protein | APR52_12840 | Not Available | Positive | 2810265 - 2810480 | 7779.55 |
| 3-oxoacyl-acp reductase | APR52_12845 | P21158 | Negative | 2810496 - 2811197 | 24941.0 |
| lysr family transcriptional regulator | APR52_12850 | P03031 | Positive | 2811329 - 2812252 | 33425.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
