Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | APR52_12750 | P03030 | Negative | 2788956 - 2789873 | 32633.9 |
| threonine aldolase | APR52_12755 | Q8RXU4 | Positive | 2789959 - 2791026 | 36911.4 |
| abc transporter substrate-binding protein | APR52_12760 | Not Available | Positive | 2791052 - 2792032 | 34376.7 |
| thioredoxin | APR52_12765 | Not Available | Positive | 2792168 - 2792725 | 20100.0 |
| two-component system response regulator | APR52_12770 | G3XCY6 | Negative | 2792852 - 2793592 | 27943.0 |
| peroxiredoxin | APR52_12775 | P0A0V4 | Positive | 2793859 - 2794278 | 14351.9 |
| hypothetical protein | APR52_12785 | P55425 | Negative | 2795193 - 2795498 | 11101.0 |
| thioesterase | APR52_12790 | Not Available | Negative | 2796082 - 2796531 | 16395.7 |
| chromosome partitioning protein parb | APR52_12795 | Not Available | Negative | 2796740 - 2798788 | 73396.9 |
| hypothetical protein | APR52_12800 | Not Available | Negative | 2798889 - 2799719 | 30855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
