Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l14 | APR52_12700 | A1WKA6 | Negative | 2780727 - 2781095 | 13153.3 |
| hypothetical protein | APR52_12705 | Not Available | Positive | 2781321 - 2782505 | 41866.8 |
| pyrroline-5-carboxylate reductase | APR52_12710 | P22008 | Positive | 2782502 - 2783359 | 29413.2 |
| dehydratase | APR52_12715 | P25200 | Negative | 2783366 - 2783881 | 18981.6 |
| 4-hydroxybenzoate octaprenyltransferase | APR52_12720 | A1TJR2 | Negative | 2783907 - 2784806 | 32879.2 |
| dna starvation/stationary phase protection protein | APR52_12725 | P73321 | Negative | 2784803 - 2785384 | 21155.2 |
| lysr family transcriptional regulator | APR52_12730 | Q9X725 | Negative | 2785542 - 2786507 | 35634.4 |
| tautomerase | APR52_12735 | Not Available | Negative | 2786582 - 2786977 | 14919.0 |
| arac family transcriptional regulator | APR52_12740 | Q28IU1 | Negative | 2787008 - 2787811 | 28233.8 |
| arac family transcriptional regulator | APR52_12745 | Not Available | Positive | 2788002 - 2788946 | 34514.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
