Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit secy | APR52_12650 | P0AGA4 | Negative | 2775615 - 2776928 | 47585.4 |
| 50s ribosomal protein l15 | APR52_12655 | C5CQ81 | Negative | 2776961 - 2777392 | 14577.0 |
| 50s ribosomal protein l30 | APR52_12660 | A9BRW9 | Negative | 2777404 - 2777589 | 6805.47 |
| 30s ribosomal protein s5 | APR52_12665 | C5CQ83 | Negative | 2777625 - 2778143 | 18132.1 |
| 50s ribosomal protein l18 | APR52_12670 | Q21QN9 | Negative | 2778162 - 2778527 | 12665.3 |
| 50s ribosomal protein l6 | APR52_12675 | C5CQ85 | Negative | 2778542 - 2779075 | 18892.0 |
| 30s ribosomal protein s8 | APR52_12680 | A1WKA2 | Negative | 2779100 - 2779495 | 14064.2 |
| 30s ribosomal protein s14 | APR52_12685 | A1VJ28 | Negative | 2779516 - 2779821 | 11380.9 |
| 50s ribosomal protein l5 | APR52_12690 | C5CQ88 | Negative | 2779830 - 2780369 | 20066.6 |
| 50s ribosomal protein l24 | APR52_12695 | C5CQ89 | Negative | 2780381 - 2780713 | 11822.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
