Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | APR52_12600 | Not Available | Positive | 2767931 - 2768785 | 30558.8 |
| acyl-coa dehydrogenase | APR52_12605 | J7TF92 | Positive | 2768790 - 2769980 | 42138.6 |
| 2-aminobenzoate-coa ligase | APR52_12610 | Not Available | Positive | 2769977 - 2771629 | 59021.0 |
| enamine deaminase rida | APR52_12615 | Not Available | Positive | 2771623 - 2772021 | 14595.7 |
| Trna-met | Not Available | Not Available | Positive | 2772167 - 2772243 | Not Available |
| 50s ribosomal protein l17 | APR52_12625 | C5CQ74 | Negative | 2772265 - 2772666 | 14957.5 |
| dna-directed rna polymerase subunit alpha | APR52_12630 | C5CQ75 | Negative | 2772754 - 2773743 | 36158.6 |
| 30s ribosomal protein s4 | APR52_12635 | C5CQ76 | Negative | 2773889 - 2774512 | 23524.2 |
| 30s ribosomal protein s11 | APR52_12640 | C5CQ77 | Negative | 2774643 - 2775047 | 14142.9 |
| 30s ribosomal protein s13 | APR52_12645 | C5CQ78 | Negative | 2775061 - 2775426 | 13801.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
